Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ska3Q8C263 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.31□□□□□ -0.6
Ska3Q8C263 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm14130-201ENSMUST00000118417 987 ntBASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm25700-201ENSMUST00000177693 110 ntBASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.31□□□□□ -0.6
Ska3Q8C263 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ska3Q8C263 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.31□□□□□ -0.6
Ska3Q8C263 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm9257-201ENSMUST00000221254 232 ntBASIC11.31□□□□□ -0.6
Ska3Q8C263 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ska3Q8C263 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ska3Q8C263 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.3□□□□□ -0.6
Ska3Q8C263 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.3□□□□□ -0.6
Ska3Q8C263 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.3□□□□□ -0.6
Ska3Q8C263 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.3□□□□□ -0.6
Ska3Q8C263 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Ska3Q8C263 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ska3Q8C263 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ska3Q8C263 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ska3Q8C263 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms