Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Sh3rf3Q8C120 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm5706-201ENSMUST00000181525 993 ntBASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 AA914427-201ENSMUST00000193194 1166 ntBASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm17931-201ENSMUST00000208132 634 ntBASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sh3rf3Q8C120 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm20482-202ENSMUST00000174729 825 ntBASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm9230-201ENSMUST00000188228 532 ntBASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sh3rf3Q8C120 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms