Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Gm15004-201ENSMUST00000119192 630 ntBASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Gm7666-201ENSMUST00000146631 819 ntBASIC12.71□□□□□ -0.37
Rd3Q8BRE0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Gm9463-201ENSMUST00000206707 601 ntBASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Gm2517-201ENSMUST00000215651 348 ntBASIC12.71□□□□□ -0.37
Rd3Q8BRE0 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rd3Q8BRE0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rd3Q8BRE0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Gm13916-201ENSMUST00000117368 628 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Gm14585-201ENSMUST00000120713 634 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Gm15595-201ENSMUST00000120840 961 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Gm13263-201ENSMUST00000121271 838 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rd3Q8BRE0 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Gm15207-201ENSMUST00000119259 442 ntBASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Gm15610-201ENSMUST00000120584 195 ntBASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Gm11246-201ENSMUST00000120880 345 ntBASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Gm9630-201ENSMUST00000178304 885 ntBASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.69□□□□□ -0.38
Rd3Q8BRE0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rd3Q8BRE0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms