Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Gm12194-201ENSMUST00000117756 1012 ntBASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Gm34379-201ENSMUST00000195036 290 ntBASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Gm42655-201ENSMUST00000202782 1134 ntBASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col16a1Q8BLX7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Gm25148-201ENSMUST00000104611 123 ntBASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Gm44953-201ENSMUST00000208745 1286 ntBASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Gm44190-201ENSMUST00000205083 1401 ntBASIC15.44■□□□□ 0.06
Col16a1Q8BLX7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Gm16030-201ENSMUST00000159098 603 ntBASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col16a1Q8BLX7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col16a1Q8BLX7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col16a1Q8BLX7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col16a1Q8BLX7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Col16a1Q8BLX7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Col16a1Q8BLX7 Gm37600-201ENSMUST00000193764 3292 ntBASIC15.42■□□□□ 0.06
Col16a1Q8BLX7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.42■□□□□ 0.06
Col16a1Q8BLX7 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Col16a1Q8BLX7 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms