Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Gm5190-201ENSMUST00000192434 357 ntBASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Gm43380-201ENSMUST00000200421 220 ntBASIC9.85□□□□□ -0.83
Smg1Q8BKX6 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Gm8574-201ENSMUST00000203207 924 ntBASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.85□□□□□ -0.83
Smg1Q8BKX6 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Gm26035-201ENSMUST00000083065 308 ntBASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smg1Q8BKX6 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Gm26976-201ENSMUST00000182929 908 ntBASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Gm7504-201ENSMUST00000201449 424 ntBASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Cd9-ps-201ENSMUST00000174687 650 ntBASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Gm15815-201ENSMUST00000120569 255 ntBASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Gm38233-201ENSMUST00000194259 807 ntBASIC9.84□□□□□ -0.83
Smg1Q8BKX6 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smg1Q8BKX6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Gm25569-201ENSMUST00000157175 131 ntBASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smg1Q8BKX6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms