Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh20Q8BIZ0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm22323-201ENSMUST00000103832 109 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm24231-201ENSMUST00000104315 133 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm11531-201ENSMUST00000117614 555 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm25668-201ENSMUST00000157700 129 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm26083-201ENSMUST00000157904 193 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm31256-201ENSMUST00000194705 506 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh20Q8BIZ0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Gm15703-201ENSMUST00000120250 880 ntBASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Gm27243-201ENSMUST00000183964 521 ntBASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Gm5950-201ENSMUST00000213337 772 ntBASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh20Q8BIZ0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh20Q8BIZ0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Pcdh20Q8BIZ0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.71□□□□□ -0.54
Pcdh20Q8BIZ0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh20Q8BIZ0 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh20Q8BIZ0 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh20Q8BIZ0 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh20Q8BIZ0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh20Q8BIZ0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.7□□□□□ -0.54
Pcdh20Q8BIZ0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms