Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm2546-201ENSMUST00000182630 991 ntBASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm4034-201ENSMUST00000187674 480 ntBASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm43118-201ENSMUST00000199149 775 ntBASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm42599-201ENSMUST00000201308 469 ntBASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc40Q8BI79 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc40Q8BI79 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Ccdc40Q8BI79 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc40Q8BI79 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc40Q8BI79 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Gm17420-201ENSMUST00000164753 153 ntBASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc40Q8BI79 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Gm13786-201ENSMUST00000122371 333 ntBASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Mir7085-201ENSMUST00000184353 66 ntBASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Gm7046-201ENSMUST00000221351 977 ntBASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc40Q8BI79 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms