Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm15004-201ENSMUST00000119192 630 ntBASIC12.61□□□□□ -0.39
Nod1Q8BHB0 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm23771-201ENSMUST00000178702 110 ntBASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm28324-201ENSMUST00000187913 264 ntBASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm10752-201ENSMUST00000218348 729 ntBASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.61□□□□□ -0.39
Nod1Q8BHB0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.61□□□□□ -0.39
Nod1Q8BHB0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gm15610-201ENSMUST00000120584 195 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gm9645-201ENSMUST00000197131 792 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gm18893-201ENSMUST00000198416 943 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gm2553-201ENSMUST00000215986 605 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Snora73b-201ENSMUST00000083419 205 ntBASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nod1Q8BHB0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nod1Q8BHB0 Gm15352-201ENSMUST00000118696 270 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms