Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.78□□□□□ -0.36
CtifQ6PEE2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtifQ6PEE2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CtifQ6PEE2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CtifQ6PEE2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtifQ6PEE2 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtifQ6PEE2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.77□□□□□ -0.36
CtifQ6PEE2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtifQ6PEE2 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CtifQ6PEE2 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtifQ6PEE2 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtifQ6PEE2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CtifQ6PEE2 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.77□□□□□ -0.37
CtifQ6PEE2 Gm42693-201ENSMUST00000196779 631 ntBASIC12.77□□□□□ -0.37
CtifQ6PEE2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtifQ6PEE2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.77□□□□□ -0.37
CtifQ6PEE2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CtifQ6PEE2 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CtifQ6PEE2 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtifQ6PEE2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.77□□□□□ -0.37
CtifQ6PEE2 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.76□□□□□ -0.37
CtifQ6PEE2 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm18304-201ENSMUST00000189162 546 ntBASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm28631-201ENSMUST00000190740 334 ntBASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm7775-201ENSMUST00000218871 853 ntBASIC12.76□□□□□ -0.37
CtifQ6PEE2 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.76□□□□□ -0.37
CtifQ6PEE2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtifQ6PEE2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Gm16215-201ENSMUST00000161990 637 ntBASIC12.75□□□□□ -0.37
CtifQ6PEE2 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12.75□□□□□ -0.37
CtifQ6PEE2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms