Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sp140Q6NSQ5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gm15610-201ENSMUST00000120584 195 ntBASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gm5070-201ENSMUST00000177599 862 ntBASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gzmn-202ENSMUST00000225535 989 ntBASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sp140Q6NSQ5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm11930-201ENSMUST00000117788 190 ntBASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm6963-201ENSMUST00000147879 379 ntBASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm9230-201ENSMUST00000188228 532 ntBASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm8885-201ENSMUST00000189382 598 ntBASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm18893-201ENSMUST00000198416 943 ntBASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm43630-201ENSMUST00000201550 776 ntBASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sp140Q6NSQ5 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.15□□□□□ -0.47
Sp140Q6NSQ5 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms