Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Sdc3Q64519 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.58□□□□□ -0.56
Sdc3Q64519 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.58□□□□□ -0.56
Sdc3Q64519 Mir3102-201ENSMUST00000175555 104 ntBASIC11.58□□□□□ -0.56
Sdc3Q64519 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sdc3Q64519 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.58□□□□□ -0.56
Sdc3Q64519 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.58□□□□□ -0.56
Sdc3Q64519 Gm19994-201ENSMUST00000217086 586 ntBASIC11.58□□□□□ -0.56
Sdc3Q64519 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.58□□□□□ -0.56
Sdc3Q64519 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.58□□□□□ -0.56
Sdc3Q64519 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sdc3Q64519 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm23200-201ENSMUST00000104379 132 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.57□□□□□ -0.56
Sdc3Q64519 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm29615-201ENSMUST00000185371 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm28224-201ENSMUST00000186078 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm29001-201ENSMUST00000186177 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm28292-201ENSMUST00000186593 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm28101-201ENSMUST00000187608 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm29076-201ENSMUST00000187689 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm28302-201ENSMUST00000187931 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm28646-201ENSMUST00000188220 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm28205-201ENSMUST00000189177 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm29032-201ENSMUST00000189797 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm28695-201ENSMUST00000190300 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm37448-201ENSMUST00000192795 697 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.57□□□□□ -0.56
Sdc3Q64519 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.57□□□□□ -0.56
Sdc3Q64519 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.57□□□□□ -0.56
Sdc3Q64519 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.57□□□□□ -0.56
Sdc3Q64519 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.57□□□□□ -0.56
Sdc3Q64519 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sdc3Q64519 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sdc3Q64519 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sdc3Q64519 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Sdc3Q64519 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.56□□□□□ -0.56
Sdc3Q64519 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sdc3Q64519 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sdc3Q64519 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sdc3Q64519 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sdc3Q64519 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms