Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Scn9aQ62205 Gm13204-201ENSMUST00000120110 821 ntBASIC13.85□□□□□ -0.19
Scn9aQ62205 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Gm24328-201ENSMUST00000175104 67 ntBASIC13.85□□□□□ -0.19
Scn9aQ62205 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.85□□□□□ -0.19
Scn9aQ62205 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Scn9aQ62205 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Gm13039-201ENSMUST00000118638 794 ntBASIC13.85□□□□□ -0.19
Scn9aQ62205 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.85□□□□□ -0.19
Scn9aQ62205 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn9aQ62205 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Scn9aQ62205 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn9aQ62205 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC13.85□□□□□ -0.19
Scn9aQ62205 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.85□□□□□ -0.19
Scn9aQ62205 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Scn9aQ62205 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC13.84□□□□□ -0.19
Scn9aQ62205 Gm15549-201ENSMUST00000121595 622 ntBASIC13.84□□□□□ -0.19
Scn9aQ62205 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Gm25677-201ENSMUST00000174983 72 ntBASIC13.84□□□□□ -0.19
Scn9aQ62205 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.84□□□□□ -0.19
Scn9aQ62205 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.84□□□□□ -0.19
Scn9aQ62205 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 AC162932.1-201ENSMUST00000219209 872 ntBASIC13.84□□□□□ -0.19
Scn9aQ62205 Gm5468-202ENSMUST00000227851 682 ntBASIC13.84□□□□□ -0.19
Scn9aQ62205 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.84□□□□□ -0.19
Scn9aQ62205 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Scn9aQ62205 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Scn9aQ62205 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn9aQ62205 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn9aQ62205 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Scn9aQ62205 Gm25830-201ENSMUST00000158923 132 ntBASIC13.83□□□□□ -0.19
Scn9aQ62205 Gm27956-201ENSMUST00000175604 260 ntBASIC13.83□□□□□ -0.19
Scn9aQ62205 Gm11942-201ENSMUST00000180255 345 ntBASIC13.83□□□□□ -0.19
Scn9aQ62205 Gm18035-201ENSMUST00000211962 589 ntBASIC13.83□□□□□ -0.19
Scn9aQ62205 Lect2-202ENSMUST00000225183 823 ntBASIC13.83□□□□□ -0.19
Scn9aQ62205 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn9aQ62205 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn9aQ62205 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Scn9aQ62205 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn9aQ62205 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Scn9aQ62205 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms