Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.93□□□□□ -0.66
VcanQ62059 CT010506.1-201ENSMUST00000223673 349 ntBASIC10.93□□□□□ -0.66
VcanQ62059 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
VcanQ62059 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
VcanQ62059 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Gm42970-201ENSMUST00000196407 1352 ntBASIC10.93□□□□□ -0.66
VcanQ62059 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Mir598-201ENSMUST00000102094 79 ntBASIC10.93□□□□□ -0.66
VcanQ62059 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Gm8255-201ENSMUST00000218693 305 ntBASIC10.93□□□□□ -0.66
VcanQ62059 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
VcanQ62059 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Gm12072-201ENSMUST00000118293 715 ntBASIC10.92□□□□□ -0.66
VcanQ62059 Gm16209-201ENSMUST00000118457 627 ntBASIC10.92□□□□□ -0.66
VcanQ62059 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.92□□□□□ -0.66
VcanQ62059 Gm10171-201ENSMUST00000126220 628 ntBASIC10.92□□□□□ -0.66
VcanQ62059 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Gm7525-201ENSMUST00000219425 454 ntBASIC10.92□□□□□ -0.66
VcanQ62059 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.92□□□□□ -0.66
VcanQ62059 CT009550.1-201ENSMUST00000225750 864 ntBASIC10.92□□□□□ -0.66
VcanQ62059 Gm10233-201ENSMUST00000089275 628 ntBASIC10.92□□□□□ -0.66
VcanQ62059 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.92□□□□□ -0.66
VcanQ62059 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.92□□□□□ -0.66
VcanQ62059 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
VcanQ62059 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
VcanQ62059 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.92□□□□□ -0.66
VcanQ62059 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 AC154461.1-201ENSMUST00000224207 1005 ntBASIC10.92□□□□□ -0.66
VcanQ62059 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
VcanQ62059 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
VcanQ62059 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
VcanQ62059 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.91□□□□□ -0.66
VcanQ62059 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.91□□□□□ -0.66
VcanQ62059 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
VcanQ62059 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
VcanQ62059 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.91□□□□□ -0.66
VcanQ62059 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.91□□□□□ -0.66
VcanQ62059 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC10.91□□□□□ -0.66
VcanQ62059 Ighv5-1-201ENSMUST00000193324 353 ntBASIC10.91□□□□□ -0.66
VcanQ62059 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.91□□□□□ -0.66
VcanQ62059 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
VcanQ62059 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
VcanQ62059 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VcanQ62059 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
VcanQ62059 Gm15373-201ENSMUST00000121495 214 ntBASIC10.91□□□□□ -0.66
VcanQ62059 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC10.91□□□□□ -0.66
VcanQ62059 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Gm16030-201ENSMUST00000159098 603 ntBASIC10.91□□□□□ -0.66
VcanQ62059 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.91□□□□□ -0.66
VcanQ62059 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.91□□□□□ -0.66
VcanQ62059 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
VcanQ62059 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
VcanQ62059 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Gm13608-201ENSMUST00000121807 1406 ntBASIC10.91□□□□□ -0.66
VcanQ62059 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.91□□□□□ -0.66
VcanQ62059 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
VcanQ62059 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Gm14760-201ENSMUST00000121831 999 ntBASIC10.91□□□□□ -0.66
VcanQ62059 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
VcanQ62059 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC10.91□□□□□ -0.66
VcanQ62059 AC124356.1-201ENSMUST00000221469 698 ntBASIC10.91□□□□□ -0.66
VcanQ62059 AC129017.2-201ENSMUST00000226118 1284 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms