Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd1Q61466 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Gm4310-201ENSMUST00000177847 889 ntBASIC12.47□□□□□ -0.41
Smarcd1Q61466 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Gm5733-201ENSMUST00000190232 939 ntBASIC12.47□□□□□ -0.41
Smarcd1Q61466 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.47□□□□□ -0.41
Smarcd1Q61466 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.47□□□□□ -0.41
Smarcd1Q61466 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.47□□□□□ -0.41
Smarcd1Q61466 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Nsd1-205ENSMUST00000224693 852 ntBASIC12.47□□□□□ -0.41
Smarcd1Q61466 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd1Q61466 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Gm15207-201ENSMUST00000119259 442 ntBASIC12.46□□□□□ -0.41
Smarcd1Q61466 Gm8199-201ENSMUST00000121323 823 ntBASIC12.46□□□□□ -0.41
Smarcd1Q61466 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Gm38117-201ENSMUST00000194653 939 ntBASIC12.46□□□□□ -0.41
Smarcd1Q61466 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.46□□□□□ -0.41
Smarcd1Q61466 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Spcs1-203ENSMUST00000226374 592 ntBASIC12.46□□□□□ -0.41
Smarcd1Q61466 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.46□□□□□ -0.41
Smarcd1Q61466 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Smarcd1Q61466 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd1Q61466 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.45□□□□□ -0.42
Smarcd1Q61466 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd1Q61466 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
Smarcd1Q61466 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd1Q61466 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms