Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Ift88Q61371 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ift88Q61371 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ift88Q61371 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ift88Q61371 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ift88Q61371 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ift88Q61371 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ift88Q61371 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.24□□□□□ -0.29
Ift88Q61371 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Ift88Q61371 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Gm13226-201ENSMUST00000117838 404 ntBASIC13.24□□□□□ -0.29
Ift88Q61371 Gm14832-201ENSMUST00000121289 322 ntBASIC13.24□□□□□ -0.29
Ift88Q61371 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Gm37008-201ENSMUST00000195712 319 ntBASIC13.24□□□□□ -0.29
Ift88Q61371 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Ift88Q61371 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ift88Q61371 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ift88Q61371 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ift88Q61371 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ift88Q61371 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.23□□□□□ -0.29
Ift88Q61371 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Gm24845-201ENSMUST00000158034 109 ntBASIC13.23□□□□□ -0.29
Ift88Q61371 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.23□□□□□ -0.29
Ift88Q61371 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.23□□□□□ -0.29
Ift88Q61371 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.23□□□□□ -0.29
Ift88Q61371 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ift88Q61371 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ift88Q61371 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.22□□□□□ -0.29
Ift88Q61371 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.22□□□□□ -0.29
Ift88Q61371 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.22□□□□□ -0.29
Ift88Q61371 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.22□□□□□ -0.29
Ift88Q61371 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.22□□□□□ -0.29
Ift88Q61371 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms