Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
ClpbQ60649 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.54□□□□□ -0.56
ClpbQ60649 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClpbQ60649 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.54□□□□□ -0.56
ClpbQ60649 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ClpbQ60649 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
ClpbQ60649 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ClpbQ60649 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.53□□□□□ -0.56
ClpbQ60649 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.53□□□□□ -0.56
ClpbQ60649 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Gm13296-201ENSMUST00000117854 997 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Gm14017-201ENSMUST00000121934 386 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.53□□□□□ -0.56
ClpbQ60649 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Gm25700-201ENSMUST00000177693 110 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.53□□□□□ -0.56
ClpbQ60649 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Gm5363-201ENSMUST00000211927 938 ntBASIC11.53□□□□□ -0.56
ClpbQ60649 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
ClpbQ60649 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
ClpbQ60649 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
ClpbQ60649 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.53□□□□□ -0.56
ClpbQ60649 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.52□□□□□ -0.56
ClpbQ60649 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
ClpbQ60649 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Gm24934-201ENSMUST00000103764 111 ntBASIC11.52□□□□□ -0.57
ClpbQ60649 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Gm12015-201ENSMUST00000117065 843 ntBASIC11.52□□□□□ -0.57
ClpbQ60649 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Gm6963-201ENSMUST00000147879 379 ntBASIC11.52□□□□□ -0.57
ClpbQ60649 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.52□□□□□ -0.57
ClpbQ60649 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ClpbQ60649 Gm5070-201ENSMUST00000177599 862 ntBASIC11.52□□□□□ -0.57
ClpbQ60649 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
ClpbQ60649 Gm37466-201ENSMUST00000195692 652 ntBASIC11.52□□□□□ -0.57
ClpbQ60649 Gm42937-201ENSMUST00000197360 752 ntBASIC11.52□□□□□ -0.57
ClpbQ60649 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.52□□□□□ -0.57
ClpbQ60649 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms