Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Gm26286-201ENSMUST00000104166 134 ntBASIC11.48□□□□□ -0.57
Xrcc1Q60596 Gm12380-201ENSMUST00000119012 544 ntBASIC11.48□□□□□ -0.57
Xrcc1Q60596 Gm14277-201ENSMUST00000121195 360 ntBASIC11.48□□□□□ -0.57
Xrcc1Q60596 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Gm28071-201ENSMUST00000190355 478 ntBASIC11.48□□□□□ -0.57
Xrcc1Q60596 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.48□□□□□ -0.57
Xrcc1Q60596 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.48□□□□□ -0.57
Xrcc1Q60596 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Xrcc1Q60596 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.47□□□□□ -0.57
Xrcc1Q60596 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Gm15711-201ENSMUST00000118889 535 ntBASIC11.47□□□□□ -0.57
Xrcc1Q60596 Gm15610-201ENSMUST00000120584 195 ntBASIC11.47□□□□□ -0.57
Xrcc1Q60596 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Gm5363-201ENSMUST00000211927 938 ntBASIC11.47□□□□□ -0.57
Xrcc1Q60596 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.47□□□□□ -0.57
Xrcc1Q60596 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Xrcc1Q60596 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Xrcc1Q60596 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms