Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm8731-201ENSMUST00000118088 412 ntBASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm14441-201ENSMUST00000121960 540 ntBASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm25076-201ENSMUST00000104098 132 ntBASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm14274-201ENSMUST00000117182 615 ntBASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm42433-201ENSMUST00000196806 940 ntBASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.68□□□□□ -0.22
Ccdc88aQ5SNZ0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm15352-201ENSMUST00000118696 270 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm15566-201ENSMUST00000121130 590 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm27910-201ENSMUST00000185004 107 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm26013-201ENSMUST00000104404 119 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm15036-201ENSMUST00000118880 400 ntBASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ccdc88aQ5SNZ0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms