Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm12036-201ENSMUST00000120008 530 ntBASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm14247-201ENSMUST00000120950 237 ntBASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav5d-4Q5R1F6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm7722-201ENSMUST00000120646 741 ntBASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm3096-201ENSMUST00000185770 364 ntBASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Trav5d-4Q5R1F6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms