Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm45925-201ENSMUST00000218882 744 ntBASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm5781-201ENSMUST00000219792 443 ntBASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm15920-201ENSMUST00000118998 402 ntBASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm42693-201ENSMUST00000196779 631 ntBASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm10076-201ENSMUST00000073238 384 ntBASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.31□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.3□□□□□ -0.92
Trav15-1-dv6-1Q5R1D2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms