Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 AC113082.1-201ENSMUST00000217324 327 ntBASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim41Q5NCC3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC20.88■□□□□ 0.93
Trim41Q5NCC3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Gm23675-201ENSMUST00000157311 125 ntBASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Gm8815-201ENSMUST00000173809 620 ntBASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim41Q5NCC3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Gm4310-201ENSMUST00000177847 889 ntBASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Gm17877-201ENSMUST00000192578 814 ntBASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Gm44647-201ENSMUST00000207402 428 ntBASIC20.86■□□□□ 0.93
Trim41Q5NCC3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Gm2875-201ENSMUST00000211333 360 ntBASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Gm6430-201ENSMUST00000054664 1248 ntBASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Gm37859-201ENSMUST00000195529 2173 ntBASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim41Q5NCC3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Gm25063-201ENSMUST00000104666 94 ntBASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Gm16071-201ENSMUST00000119589 793 ntBASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Gm17826-201ENSMUST00000189720 798 ntBASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Gm44980-201ENSMUST00000205826 314 ntBASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim41Q5NCC3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms