Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.86□□□□□ -0.51
Scn2bQ56A07 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.86□□□□□ -0.51
Scn2bQ56A07 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.85□□□□□ -0.51
Scn2bQ56A07 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.85□□□□□ -0.51
Scn2bQ56A07 Gm24934-201ENSMUST00000103764 111 ntBASIC11.85□□□□□ -0.51
Scn2bQ56A07 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.85□□□□□ -0.51
Scn2bQ56A07 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Gm2546-201ENSMUST00000182630 991 ntBASIC11.85□□□□□ -0.51
Scn2bQ56A07 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.85□□□□□ -0.51
Scn2bQ56A07 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.85□□□□□ -0.51
Scn2bQ56A07 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.85□□□□□ -0.51
Scn2bQ56A07 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.85□□□□□ -0.51
Scn2bQ56A07 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.85□□□□□ -0.51
Scn2bQ56A07 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.84□□□□□ -0.51
Scn2bQ56A07 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.84□□□□□ -0.51
Scn2bQ56A07 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Gm14723-201ENSMUST00000118686 215 ntBASIC11.84□□□□□ -0.51
Scn2bQ56A07 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.84□□□□□ -0.51
Scn2bQ56A07 Rprl1-201ENSMUST00000158050 327 ntBASIC11.84□□□□□ -0.51
Scn2bQ56A07 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.84□□□□□ -0.51
Scn2bQ56A07 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Scn2bQ56A07 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.84□□□□□ -0.51
Scn2bQ56A07 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.84□□□□□ -0.51
Scn2bQ56A07 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.84□□□□□ -0.51
Scn2bQ56A07 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms