Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ddx49Q4FZF3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC14□□□□□ -0.17
Ddx49Q4FZF3 Gm18711-201ENSMUST00000199341 750 ntBASIC14□□□□□ -0.17
Ddx49Q4FZF3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ddx49Q4FZF3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Gm8731-201ENSMUST00000118088 412 ntBASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Gm14760-201ENSMUST00000121831 999 ntBASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.99□□□□□ -0.17
Ddx49Q4FZF3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Gm12579-201ENSMUST00000118040 783 ntBASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Gm4654-201ENSMUST00000183305 982 ntBASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Gm2875-201ENSMUST00000211333 360 ntBASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Matn2-203ENSMUST00000226766 3252 ntBASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ddx49Q4FZF3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms