Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam196aQ3USH1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.08□□□□□ -0.47
Fam196aQ3USH1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Gm5419-201ENSMUST00000119301 527 ntBASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Gm20414-201ENSMUST00000172918 646 ntBASIC12.08□□□□□ -0.48
Fam196aQ3USH1 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Gm38117-201ENSMUST00000194653 939 ntBASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Gm18561-201ENSMUST00000206027 804 ntBASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Olfr584-201ENSMUST00000098210 964 ntBASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Fam196aQ3USH1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm25053-201ENSMUST00000103982 133 ntBASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm25922-201ENSMUST00000104281 130 ntBASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm9089-201ENSMUST00000122027 526 ntBASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm24679-201ENSMUST00000158762 111 ntBASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm25053-202ENSMUST00000199731 132 ntBASIC12.07□□□□□ -0.48
Fam196aQ3USH1 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm43969-201ENSMUST00000204833 535 ntBASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Fam196aQ3USH1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Fam196aQ3USH1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms