Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gm11989-201ENSMUST00000117240 672 ntBASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gm11362-201ENSMUST00000118838 850 ntBASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gm14726-201ENSMUST00000120623 896 ntBASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gm7722-201ENSMUST00000120646 741 ntBASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gm27046-201ENSMUST00000182160 463 ntBASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gm21769-201ENSMUST00000211922 111 ntBASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Brf2Q3UAW9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Gm11930-201ENSMUST00000117788 190 ntBASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Gm27516-201ENSMUST00000184237 98 ntBASIC11.29□□□□□ -0.6
Brf2Q3UAW9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Gm38266-201ENSMUST00000194931 421 ntBASIC11.29□□□□□ -0.6
Brf2Q3UAW9 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Brf2Q3UAW9 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Brf2Q3UAW9 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms