Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gm45398-201ENSMUST00000210561 165 ntBASIC11.52□□□□□ -0.57
Hoxc4Q08624 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.52□□□□□ -0.57
Hoxc4Q08624 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gm10179-201ENSMUST00000086233 688 ntBASIC11.52□□□□□ -0.57
Hoxc4Q08624 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.52□□□□□ -0.57
Hoxc4Q08624 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hoxc4Q08624 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.52□□□□□ -0.57
Hoxc4Q08624 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Gm11956-201ENSMUST00000119525 512 ntBASIC11.51□□□□□ -0.57
Hoxc4Q08624 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Gm4726-201ENSMUST00000135604 736 ntBASIC11.51□□□□□ -0.57
Hoxc4Q08624 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Gm6019-201ENSMUST00000148369 736 ntBASIC11.51□□□□□ -0.57
Hoxc4Q08624 Gm24844-201ENSMUST00000158679 127 ntBASIC11.51□□□□□ -0.57
Hoxc4Q08624 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Mir8093-201ENSMUST00000185043 137 ntBASIC11.51□□□□□ -0.57
Hoxc4Q08624 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Gm38151-201ENSMUST00000195085 289 ntBASIC11.51□□□□□ -0.57
Hoxc4Q08624 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.51□□□□□ -0.57
Hoxc4Q08624 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc4Q08624 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.5□□□□□ -0.57
Hoxc4Q08624 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.5□□□□□ -0.57
Hoxc4Q08624 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Gm14585-201ENSMUST00000120713 634 ntBASIC11.5□□□□□ -0.57
Hoxc4Q08624 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Hoxc4Q08624 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms