Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox4Q06831 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.81□□□□□ -0.52
Sox4Q06831 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Sox4Q06831 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox4Q06831 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.81□□□□□ -0.52
Sox4Q06831 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sox4Q06831 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox4Q06831 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox4Q06831 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Sox4Q06831 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Sox4Q06831 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox4Q06831 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Sox4Q06831 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Sox4Q06831 Gm7857-201ENSMUST00000117957 358 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Mir6927-201ENSMUST00000184494 71 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.8□□□□□ -0.52
Sox4Q06831 Rps4l-202ENSMUST00000204242 789 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Sox4Q06831 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox4Q06831 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Sox4Q06831 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sox4Q06831 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Sox4Q06831 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.8□□□□□ -0.52
Sox4Q06831 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox4Q06831 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.8□□□□□ -0.52
Sox4Q06831 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sox4Q06831 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Sox4Q06831 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Sox4Q06831 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.79□□□□□ -0.52
Sox4Q06831 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sox4Q06831 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.79□□□□□ -0.52
Sox4Q06831 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sox4Q06831 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.79□□□□□ -0.52
Sox4Q06831 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Sox4Q06831 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Gm27552-201ENSMUST00000183351 62 ntBASIC11.79□□□□□ -0.52
Sox4Q06831 Gm27844-201ENSMUST00000183613 62 ntBASIC11.79□□□□□ -0.52
Sox4Q06831 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Gm18038-201ENSMUST00000197900 485 ntBASIC11.79□□□□□ -0.52
Sox4Q06831 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.79□□□□□ -0.52
Sox4Q06831 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox4Q06831 Gm270-201ENSMUST00000223010 976 ntBASIC11.79□□□□□ -0.52
Sox4Q06831 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox4Q06831 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms