Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.26□□□□□ -0.77
Smn1P97801 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Smn1P97801 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Smn1P97801 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.25□□□□□ -0.77
Smn1P97801 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smn1P97801 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
Smn1P97801 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.25□□□□□ -0.77
Smn1P97801 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.25□□□□□ -0.77
Smn1P97801 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.25□□□□□ -0.77
Smn1P97801 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.25□□□□□ -0.77
Smn1P97801 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.25□□□□□ -0.77
Smn1P97801 Auts2-212ENSMUST00000178555 309 ntBASIC10.25□□□□□ -0.77
Smn1P97801 Gm27682-201ENSMUST00000183930 110 ntBASIC10.25□□□□□ -0.77
Smn1P97801 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.25□□□□□ -0.77
Smn1P97801 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.25□□□□□ -0.77
Smn1P97801 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.25□□□□□ -0.77
Smn1P97801 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Smn1P97801 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.25□□□□□ -0.77
Smn1P97801 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC10.25□□□□□ -0.77
Smn1P97801 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Smn1P97801 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Smn1P97801 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Smn1P97801 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Smn1P97801 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.24□□□□□ -0.77
Smn1P97801 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.24□□□□□ -0.77
Smn1P97801 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smn1P97801 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Smn1P97801 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.24□□□□□ -0.77
Smn1P97801 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Smn1P97801 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Smn1P97801 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Smn1P97801 Gm23912-201ENSMUST00000104687 87 ntBASIC10.24□□□□□ -0.77
Smn1P97801 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.24□□□□□ -0.77
Smn1P97801 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Gm1335-201ENSMUST00000121653 386 ntBASIC10.24□□□□□ -0.77
Smn1P97801 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.24□□□□□ -0.77
Smn1P97801 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.24□□□□□ -0.77
Smn1P97801 Gm9002-201ENSMUST00000178437 499 ntBASIC10.24□□□□□ -0.77
Smn1P97801 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Smn1P97801 Gm29649-201ENSMUST00000185649 419 ntBASIC10.24□□□□□ -0.77
Smn1P97801 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.24□□□□□ -0.77
Smn1P97801 Gm42937-201ENSMUST00000197360 752 ntBASIC10.24□□□□□ -0.77
Smn1P97801 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Gm7561-201ENSMUST00000211203 886 ntBASIC10.24□□□□□ -0.77
Smn1P97801 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.24□□□□□ -0.77
Smn1P97801 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.24□□□□□ -0.77
Smn1P97801 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.24□□□□□ -0.77
Smn1P97801 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Smn1P97801 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smn1P97801 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms