Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.75□□□□□ -0.69
SgcbP82349 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.75□□□□□ -0.69
SgcbP82349 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SgcbP82349 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SgcbP82349 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SgcbP82349 Rgr-203ENSMUST00000225070 4704 ntBASIC10.75□□□□□ -0.69
SgcbP82349 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.74□□□□□ -0.69
SgcbP82349 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
SgcbP82349 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
SgcbP82349 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.74□□□□□ -0.69
SgcbP82349 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.74□□□□□ -0.69
SgcbP82349 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.74□□□□□ -0.69
SgcbP82349 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.74□□□□□ -0.69
SgcbP82349 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
SgcbP82349 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.74□□□□□ -0.69
SgcbP82349 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.74□□□□□ -0.69
SgcbP82349 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.74□□□□□ -0.69
SgcbP82349 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.74□□□□□ -0.69
SgcbP82349 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.74□□□□□ -0.69
SgcbP82349 Gm40332-201ENSMUST00000199847 938 ntBASIC10.74□□□□□ -0.69
SgcbP82349 Gm43962-201ENSMUST00000203898 190 ntBASIC10.74□□□□□ -0.69
SgcbP82349 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.74□□□□□ -0.69
SgcbP82349 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.74□□□□□ -0.69
SgcbP82349 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
SgcbP82349 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.74□□□□□ -0.69
SgcbP82349 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.74□□□□□ -0.69
SgcbP82349 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.74□□□□□ -0.69
SgcbP82349 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.74□□□□□ -0.69
SgcbP82349 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
SgcbP82349 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SgcbP82349 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
SgcbP82349 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
SgcbP82349 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Gm22133-201ENSMUST00000102082 109 ntBASIC10.73□□□□□ -0.69
SgcbP82349 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.73□□□□□ -0.69
SgcbP82349 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SgcbP82349 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms