Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.04□□□□□ -0.48
SmoP56726 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.04□□□□□ -0.48
SmoP56726 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.04□□□□□ -0.48
SmoP56726 Gm23251-201ENSMUST00000103773 110 ntBASIC12.04□□□□□ -0.48
SmoP56726 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SmoP56726 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SmoP56726 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.04□□□□□ -0.48
SmoP56726 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.04□□□□□ -0.48
SmoP56726 Gm8199-201ENSMUST00000121323 823 ntBASIC12.04□□□□□ -0.48
SmoP56726 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.04□□□□□ -0.48
SmoP56726 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
SmoP56726 Gm20426-201ENSMUST00000173657 440 ntBASIC12.04□□□□□ -0.48
SmoP56726 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.04□□□□□ -0.48
SmoP56726 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.04□□□□□ -0.48
SmoP56726 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Gm9555-201ENSMUST00000200908 583 ntBASIC12.04□□□□□ -0.48
SmoP56726 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.04□□□□□ -0.48
SmoP56726 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Gm2553-201ENSMUST00000215986 605 ntBASIC12.04□□□□□ -0.48
SmoP56726 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.04□□□□□ -0.48
SmoP56726 Nsd1-205ENSMUST00000224693 852 ntBASIC12.04□□□□□ -0.48
SmoP56726 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.04□□□□□ -0.48
SmoP56726 Spcs1-203ENSMUST00000226374 592 ntBASIC12.04□□□□□ -0.48
SmoP56726 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.04□□□□□ -0.48
SmoP56726 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SmoP56726 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.03□□□□□ -0.48
SmoP56726 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SmoP56726 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SmoP56726 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SmoP56726 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Gm24891-201ENSMUST00000104391 136 ntBASIC12.03□□□□□ -0.48
SmoP56726 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Gm11331-201ENSMUST00000119764 288 ntBASIC12.03□□□□□ -0.48
SmoP56726 Gm13461-201ENSMUST00000120980 662 ntBASIC12.03□□□□□ -0.48
SmoP56726 Gm14441-201ENSMUST00000121960 540 ntBASIC12.03□□□□□ -0.48
SmoP56726 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SmoP56726 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Gm9192-201ENSMUST00000183221 985 ntBASIC12.03□□□□□ -0.48
SmoP56726 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.03□□□□□ -0.48
SmoP56726 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.03□□□□□ -0.48
SmoP56726 Gm37246-201ENSMUST00000192665 835 ntBASIC12.03□□□□□ -0.48
SmoP56726 Gm43378-201ENSMUST00000199336 582 ntBASIC12.03□□□□□ -0.48
SmoP56726 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.03□□□□□ -0.48
SmoP56726 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.03□□□□□ -0.48
SmoP56726 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.03□□□□□ -0.48
SmoP56726 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SmoP56726 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SmoP56726 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SmoP56726 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SmoP56726 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
SmoP56726 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SmoP56726 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.02□□□□□ -0.48
SmoP56726 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.02□□□□□ -0.49
SmoP56726 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SmoP56726 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms