Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Gm14109-201ENSMUST00000118814 309 ntBASIC10.74□□□□□ -0.69
Abcd3P55096 Gm27046-201ENSMUST00000182160 463 ntBASIC10.74□□□□□ -0.69
Abcd3P55096 Gm8885-201ENSMUST00000189382 598 ntBASIC10.74□□□□□ -0.69
Abcd3P55096 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Gm38241-201ENSMUST00000192641 898 ntBASIC10.74□□□□□ -0.69
Abcd3P55096 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.74□□□□□ -0.69
Abcd3P55096 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Abcd3P55096 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Abcd3P55096 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.74□□□□□ -0.69
Abcd3P55096 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Abcd3P55096 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.74□□□□□ -0.69
Abcd3P55096 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Abcd3P55096 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Abcd3P55096 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Abcd3P55096 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.73□□□□□ -0.69
Abcd3P55096 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Abcd3P55096 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Gm6963-201ENSMUST00000147879 379 ntBASIC10.73□□□□□ -0.69
Abcd3P55096 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.73□□□□□ -0.69
Abcd3P55096 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Gm5070-201ENSMUST00000177599 862 ntBASIC10.73□□□□□ -0.69
Abcd3P55096 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.73□□□□□ -0.69
Abcd3P55096 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Gm38266-201ENSMUST00000194931 421 ntBASIC10.73□□□□□ -0.69
Abcd3P55096 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC10.73□□□□□ -0.69
Abcd3P55096 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.73□□□□□ -0.69
Abcd3P55096 Gm45598-202ENSMUST00000210719 986 ntBASIC10.73□□□□□ -0.69
Abcd3P55096 Gm45865-201ENSMUST00000211815 945 ntBASIC10.73□□□□□ -0.69
Abcd3P55096 Gzmn-202ENSMUST00000225535 989 ntBASIC10.73□□□□□ -0.69
Abcd3P55096 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Abcd3P55096 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.73□□□□□ -0.69
Abcd3P55096 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
Abcd3P55096 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.73□□□□□ -0.69
Abcd3P55096 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Abcd3P55096 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Abcd3P55096 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Abcd3P55096 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Abcd3P55096 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Abcd3P55096 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Abcd3P55096 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Abcd3P55096 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Abcd3P55096 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Abcd3P55096 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Abcd3P55096 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Abcd3P55096 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.72□□□□□ -0.69
Abcd3P55096 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Abcd3P55096 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Abcd3P55096 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms