Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.3□□□□□ -0.44
TubP50586 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.3□□□□□ -0.44
TubP50586 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Gm26286-201ENSMUST00000104166 134 ntBASIC12.3□□□□□ -0.44
TubP50586 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.3□□□□□ -0.44
TubP50586 Gm24990-201ENSMUST00000157406 323 ntBASIC12.3□□□□□ -0.44
TubP50586 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TubP50586 Gm27341-201ENSMUST00000183570 106 ntBASIC12.3□□□□□ -0.44
TubP50586 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.3□□□□□ -0.44
TubP50586 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.3□□□□□ -0.44
TubP50586 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.3□□□□□ -0.44
TubP50586 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.3□□□□□ -0.44
TubP50586 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TubP50586 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.3□□□□□ -0.44
TubP50586 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.3□□□□□ -0.44
TubP50586 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.3□□□□□ -0.44
TubP50586 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TubP50586 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TubP50586 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TubP50586 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TubP50586 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.29□□□□□ -0.44
TubP50586 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TubP50586 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TubP50586 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
TubP50586 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TubP50586 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.29□□□□□ -0.44
TubP50586 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.29□□□□□ -0.44
TubP50586 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.29□□□□□ -0.44
TubP50586 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.29□□□□□ -0.44
TubP50586 Gm11439-201ENSMUST00000118598 409 ntBASIC12.29□□□□□ -0.44
TubP50586 Gm12380-201ENSMUST00000119012 544 ntBASIC12.29□□□□□ -0.44
TubP50586 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.29□□□□□ -0.44
TubP50586 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TubP50586 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.29□□□□□ -0.44
TubP50586 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
TubP50586 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.29□□□□□ -0.44
TubP50586 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.29□□□□□ -0.44
TubP50586 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.29□□□□□ -0.44
TubP50586 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.29□□□□□ -0.44
TubP50586 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.29□□□□□ -0.44
TubP50586 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.29□□□□□ -0.44
TubP50586 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TubP50586 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TubP50586 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TubP50586 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.28□□□□□ -0.44
TubP50586 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
TubP50586 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.28□□□□□ -0.44
TubP50586 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TubP50586 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.28□□□□□ -0.44
TubP50586 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
TubP50586 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TubP50586 Gm14028-201ENSMUST00000117434 479 ntBASIC12.28□□□□□ -0.44
TubP50586 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.28□□□□□ -0.44
TubP50586 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.28□□□□□ -0.44
TubP50586 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms