Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Gm38314-201ENSMUST00000195709 625 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm44216-201ENSMUST00000203942 157 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Gm12247-201ENSMUST00000117585 670 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm14034-201ENSMUST00000120147 551 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm23400-201ENSMUST00000174994 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm26463-201ENSMUST00000175065 101 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm24332-201ENSMUST00000175102 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm25959-201ENSMUST00000175112 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm22475-201ENSMUST00000175169 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm22903-201ENSMUST00000175193 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm25070-201ENSMUST00000175237 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm24159-201ENSMUST00000175264 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm25299-201ENSMUST00000175283 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm23798-201ENSMUST00000175560 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm23802-201ENSMUST00000175565 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm25708-201ENSMUST00000177687 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm24370-201ENSMUST00000178007 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm23049-201ENSMUST00000178068 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm28019-201ENSMUST00000178138 101 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm25571-201ENSMUST00000178322 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm25355-201ENSMUST00000178456 101 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm24975-201ENSMUST00000178492 101 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm23189-201ENSMUST00000178954 102 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm25100-201ENSMUST00000179750 101 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm23064-201ENSMUST00000179866 101 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Gm37197-201ENSMUST00000195607 401 ntBASIC13.23□□□□□ -0.29
Brca1P48754 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.23□□□□□ -0.29
Brca1P48754 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.23□□□□□ -0.29
Brca1P48754 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Brca1P48754 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Brca1P48754 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.22□□□□□ -0.29
Brca1P48754 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.22□□□□□ -0.29
Brca1P48754 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Brca1P48754 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Brca1P48754 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Brca1P48754 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.22□□□□□ -0.29
Brca1P48754 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Brca1P48754 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.22□□□□□ -0.29
Brca1P48754 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.22□□□□□ -0.29
Brca1P48754 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Mir432-201ENSMUST00000157230 75 ntBASIC13.22□□□□□ -0.29
Brca1P48754 Gm16030-201ENSMUST00000159098 603 ntBASIC13.22□□□□□ -0.29
Brca1P48754 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.22□□□□□ -0.29
Brca1P48754 Gm6606-201ENSMUST00000193613 947 ntBASIC13.22□□□□□ -0.29
Brca1P48754 Gm7904-201ENSMUST00000217049 465 ntBASIC13.22□□□□□ -0.29
Brca1P48754 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC13.22□□□□□ -0.29
Brca1P48754 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.22□□□□□ -0.29
Brca1P48754 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 AC154305.2-201ENSMUST00000225813 901 ntBASIC13.22□□□□□ -0.29
Brca1P48754 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Brca1P48754 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Brca1P48754 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Brca1P48754 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Brca1P48754 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Brca1P48754 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms