Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Prox1P48437 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.53□□□□□ -0.56
Prox1P48437 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.53□□□□□ -0.56
Prox1P48437 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.53□□□□□ -0.56
Prox1P48437 Gm24644-201ENSMUST00000157114 139 ntBASIC11.53□□□□□ -0.56
Prox1P48437 Mir1982-201ENSMUST00000157368 74 ntBASIC11.53□□□□□ -0.56
Prox1P48437 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.53□□□□□ -0.56
Prox1P48437 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.53□□□□□ -0.56
Prox1P48437 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.53□□□□□ -0.56
Prox1P48437 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.53□□□□□ -0.56
Prox1P48437 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Prox1P48437 Gm24136-201ENSMUST00000083374 165 ntBASIC11.53□□□□□ -0.56
Prox1P48437 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.53□□□□□ -0.56
Prox1P48437 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Prox1P48437 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Prox1P48437 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Prox1P48437 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Prox1P48437 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Prox1P48437 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.52□□□□□ -0.56
Prox1P48437 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Prox1P48437 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Prox1P48437 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Prox1P48437 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Prox1P48437 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.56
Prox1P48437 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Prox1P48437 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Prox1P48437 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.52□□□□□ -0.57
Prox1P48437 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Prox1P48437 Gm43630-201ENSMUST00000201550 776 ntBASIC11.52□□□□□ -0.57
Prox1P48437 Gm44882-201ENSMUST00000205702 802 ntBASIC11.52□□□□□ -0.57
Prox1P48437 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.52□□□□□ -0.57
Prox1P48437 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.52□□□□□ -0.57
Prox1P48437 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.52□□□□□ -0.57
Prox1P48437 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Prox1P48437 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Prox1P48437 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Prox1P48437 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Prox1P48437 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Prox1P48437 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Prox1P48437 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.51□□□□□ -0.57
Prox1P48437 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.51□□□□□ -0.57
Prox1P48437 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.51□□□□□ -0.57
Prox1P48437 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.51□□□□□ -0.57
Prox1P48437 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Prox1P48437 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Gm12742-201ENSMUST00000117326 410 ntBASIC11.51□□□□□ -0.57
Prox1P48437 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.51□□□□□ -0.57
Prox1P48437 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.51□□□□□ -0.57
Prox1P48437 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Prox1P48437 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.51□□□□□ -0.57
Prox1P48437 Gm9022-201ENSMUST00000182482 992 ntBASIC11.51□□□□□ -0.57
Prox1P48437 Gm27847-201ENSMUST00000183711 107 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms