Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vps4bP46467 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vps4bP46467 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Vps4bP46467 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Vps4bP46467 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Vps4bP46467 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vps4bP46467 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vps4bP46467 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vps4bP46467 Rgr-203ENSMUST00000225070 4704 ntBASIC12.18□□□□□ -0.46
Vps4bP46467 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Vps4bP46467 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.18□□□□□ -0.46
Vps4bP46467 Gm15610-201ENSMUST00000120584 195 ntBASIC12.18□□□□□ -0.46
Vps4bP46467 Gm14247-201ENSMUST00000120950 237 ntBASIC12.18□□□□□ -0.46
Vps4bP46467 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.18□□□□□ -0.46
Vps4bP46467 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Gm27320-201ENSMUST00000184892 109 ntBASIC12.18□□□□□ -0.46
Vps4bP46467 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.18□□□□□ -0.46
Vps4bP46467 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Vps4bP46467 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vps4bP46467 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Vps4bP46467 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Vps4bP46467 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vps4bP46467 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Vps4bP46467 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vps4bP46467 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Vps4bP46467 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.18□□□□□ -0.46
Vps4bP46467 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Vps4bP46467 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Vps4bP46467 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps4bP46467 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.17□□□□□ -0.46
Vps4bP46467 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Vps4bP46467 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.17□□□□□ -0.46
Vps4bP46467 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Vps4bP46467 Gm12241-201ENSMUST00000118330 726 ntBASIC12.17□□□□□ -0.46
Vps4bP46467 Gm14832-201ENSMUST00000121289 322 ntBASIC12.17□□□□□ -0.46
Vps4bP46467 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.17□□□□□ -0.46
Vps4bP46467 Gm38341-201ENSMUST00000195357 515 ntBASIC12.17□□□□□ -0.46
Vps4bP46467 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.17□□□□□ -0.46
Vps4bP46467 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps4bP46467 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps4bP46467 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps4bP46467 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Vps4bP46467 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps4bP46467 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.17□□□□□ -0.46
Vps4bP46467 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Vps4bP46467 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vps4bP46467 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms