Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.57□□□□□ -0.56
Tnfsf4P43488 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfsf4P43488 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Gm9996-201ENSMUST00000070359 913 ntBASIC11.57□□□□□ -0.56
Tnfsf4P43488 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.57□□□□□ -0.56
Tnfsf4P43488 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Tnfsf4P43488 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Gm11424-201ENSMUST00000121929 829 ntBASIC11.56□□□□□ -0.56
Tnfsf4P43488 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Gm24845-201ENSMUST00000158034 109 ntBASIC11.56□□□□□ -0.56
Tnfsf4P43488 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Gm27514-201ENSMUST00000183692 110 ntBASIC11.56□□□□□ -0.56
Tnfsf4P43488 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Gm17931-201ENSMUST00000208132 634 ntBASIC11.56□□□□□ -0.56
Tnfsf4P43488 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.56□□□□□ -0.56
Tnfsf4P43488 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Tnfsf4P43488 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gm22018-201ENSMUST00000104357 131 ntBASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gm15610-201ENSMUST00000120584 195 ntBASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.55□□□□□ -0.56
Tnfsf4P43488 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.55□□□□□ -0.56
Tnfsf4P43488 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.55□□□□□ -0.56
Tnfsf4P43488 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.55□□□□□ -0.56
Tnfsf4P43488 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Tnfsf4P43488 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms