Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.28□□□□□ -0.6
Sox6P40645 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.28□□□□□ -0.6
Sox6P40645 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.28□□□□□ -0.6
Sox6P40645 Gm42693-201ENSMUST00000196779 631 ntBASIC11.28□□□□□ -0.6
Sox6P40645 Gm44405-201ENSMUST00000198952 126 ntBASIC11.28□□□□□ -0.6
Sox6P40645 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Gm18054-201ENSMUST00000207539 555 ntBASIC11.28□□□□□ -0.6
Sox6P40645 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox6P40645 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.28□□□□□ -0.6
Sox6P40645 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sox6P40645 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.28□□□□□ -0.6
Sox6P40645 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox6P40645 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Sox6P40645 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox6P40645 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Sox6P40645 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.27□□□□□ -0.6
Sox6P40645 Rgr-203ENSMUST00000225070 4704 ntBASIC11.27□□□□□ -0.6
Sox6P40645 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox6P40645 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox6P40645 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox6P40645 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.27□□□□□ -0.6
Sox6P40645 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sox6P40645 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.27□□□□□ -0.6
Sox6P40645 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Sox6P40645 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Sox6P40645 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sox6P40645 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox6P40645 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Sox6P40645 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Sox6P40645 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.27□□□□□ -0.61
Sox6P40645 Gm11793-201ENSMUST00000120433 981 ntBASIC11.27□□□□□ -0.61
Sox6P40645 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.27□□□□□ -0.61
Sox6P40645 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Rmrp-201ENSMUST00000157463 271 ntBASIC11.27□□□□□ -0.61
Sox6P40645 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.27□□□□□ -0.61
Sox6P40645 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.27□□□□□ -0.61
Sox6P40645 Mospd4-201ENSMUST00000180618 576 ntBASIC11.27□□□□□ -0.61
Sox6P40645 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.27□□□□□ -0.61
Sox6P40645 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.27□□□□□ -0.61
Sox6P40645 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.27□□□□□ -0.61
Sox6P40645 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.27□□□□□ -0.61
Sox6P40645 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.27□□□□□ -0.61
Sox6P40645 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Gm9899-201ENSMUST00000065519 555 ntBASIC11.27□□□□□ -0.61
Sox6P40645 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox6P40645 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sox6P40645 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.27□□□□□ -0.61
Sox6P40645 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox6P40645 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
Sox6P40645 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sox6P40645 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.27□□□□□ -0.61
Sox6P40645 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sox6P40645 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sox6P40645 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.26□□□□□ -0.61
Sox6P40645 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sox6P40645 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.26□□□□□ -0.61
Sox6P40645 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox6P40645 Gm15703-201ENSMUST00000120250 880 ntBASIC11.26□□□□□ -0.61
Sox6P40645 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.26□□□□□ -0.61
Sox6P40645 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms