Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Gm7741-201ENSMUST00000181445 989 ntBASIC12.31□□□□□ -0.44
Cxcl12P40224 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Gm43380-201ENSMUST00000200421 220 ntBASIC12.31□□□□□ -0.44
Cxcl12P40224 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Gm7940-201ENSMUST00000218195 769 ntBASIC12.31□□□□□ -0.44
Cxcl12P40224 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.31□□□□□ -0.44
Cxcl12P40224 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cxcl12P40224 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cxcl12P40224 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Cog3-203ENSMUST00000227473 4197 ntBASIC12.3□□□□□ -0.44
Cxcl12P40224 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.3□□□□□ -0.44
Cxcl12P40224 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.3□□□□□ -0.44
Cxcl12P40224 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Gm8459-201ENSMUST00000162504 760 ntBASIC12.3□□□□□ -0.44
Cxcl12P40224 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Gm43671-201ENSMUST00000200422 433 ntBASIC12.3□□□□□ -0.44
Cxcl12P40224 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Gm14005-208ENSMUST00000223654 681 ntBASIC12.3□□□□□ -0.44
Cxcl12P40224 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Cxcl12P40224 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cxcl12P40224 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cxcl12P40224 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl12P40224 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.29□□□□□ -0.44
Cxcl12P40224 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl12P40224 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.29□□□□□ -0.44
Cxcl12P40224 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm4034-201ENSMUST00000187674 480 ntBASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.29□□□□□ -0.44
Cxcl12P40224 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm30671-201ENSMUST00000214898 318 ntBASIC12.29□□□□□ -0.44
Cxcl12P40224 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm10263-201ENSMUST00000085163 300 ntBASIC12.29□□□□□ -0.44
Cxcl12P40224 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.29□□□□□ -0.44
Cxcl12P40224 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cxcl12P40224 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Cxcl12P40224 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Cxcl12P40224 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.29□□□□□ -0.44
Cxcl12P40224 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms