Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Timp3P39876 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Timp3P39876 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Timp3P39876 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gm37849-201ENSMUST00000194722 1881 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Timp3P39876 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.88□□□□□ -0.83
Timp3P39876 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.88□□□□□ -0.83
Timp3P39876 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.88□□□□□ -0.83
Timp3P39876 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.88□□□□□ -0.83
Timp3P39876 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Mir6927-201ENSMUST00000184494 71 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gm18304-201ENSMUST00000189162 546 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Gm44958-201ENSMUST00000203734 736 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Gm8913-201ENSMUST00000209491 641 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.88□□□□□ -0.83
Timp3P39876 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.88□□□□□ -0.83
Timp3P39876 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Abhd11os-203ENSMUST00000222613 363 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Timp3P39876 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Timp3P39876 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.88□□□□□ -0.83
Timp3P39876 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.88□□□□□ -0.83
Timp3P39876 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Timp3P39876 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Timp3P39876 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Timp3P39876 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.87□□□□□ -0.83
Timp3P39876 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Timp3P39876 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Timp3P39876 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Timp3P39876 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Timp3P39876 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Gm12217-201ENSMUST00000118858 696 ntBASIC9.87□□□□□ -0.83
Timp3P39876 Gm12266-201ENSMUST00000120311 962 ntBASIC9.87□□□□□ -0.83
Timp3P39876 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.87□□□□□ -0.83
Timp3P39876 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Timp3P39876 Mir5120-201ENSMUST00000175020 78 ntBASIC9.87□□□□□ -0.83
Timp3P39876 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.87□□□□□ -0.83
Timp3P39876 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.87□□□□□ -0.83
Timp3P39876 Gm17812-201ENSMUST00000204935 318 ntBASIC9.87□□□□□ -0.83
Timp3P39876 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.87□□□□□ -0.83
Timp3P39876 Gm18730-201ENSMUST00000218038 343 ntBASIC9.87□□□□□ -0.83
Timp3P39876 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.87□□□□□ -0.83
Timp3P39876 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.87□□□□□ -0.83
Timp3P39876 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC9.87□□□□□ -0.83
Timp3P39876 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Timp3P39876 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Timp3P39876 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Timp3P39876 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms