Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cdh4P39038 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cdh4P39038 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.52□□□□□ -0.57
Cdh4P39038 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdh4P39038 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh4P39038 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh4P39038 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Cdh4P39038 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Cdh4P39038 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.51□□□□□ -0.57
Cdh4P39038 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Cdh4P39038 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Cdh4P39038 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Gm27627-201ENSMUST00000183644 150 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm29615-201ENSMUST00000185371 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm28224-201ENSMUST00000186078 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm29001-201ENSMUST00000186177 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm28292-201ENSMUST00000186593 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm28101-201ENSMUST00000187608 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm29076-201ENSMUST00000187689 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm28302-201ENSMUST00000187931 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm28646-201ENSMUST00000188220 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm28205-201ENSMUST00000189177 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm29032-201ENSMUST00000189797 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm28695-201ENSMUST00000190300 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm37448-201ENSMUST00000192795 697 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm43962-201ENSMUST00000203898 190 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Gm45186-201ENSMUST00000206874 478 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh4P39038 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Cdh4P39038 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh4P39038 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.51□□□□□ -0.57
Cdh4P39038 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh4P39038 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdh4P39038 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdh4P39038 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cdh4P39038 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Cdh4P39038 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdh4P39038 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cdh4P39038 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Cdh4P39038 Gm27390-201ENSMUST00000184516 176 ntBASIC11.5□□□□□ -0.57
Cdh4P39038 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.5□□□□□ -0.57
Cdh4P39038 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdh4P39038 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Gm5455-201ENSMUST00000058710 715 ntBASIC11.5□□□□□ -0.57
Cdh4P39038 Gm8385-201ENSMUST00000058999 643 ntBASIC11.5□□□□□ -0.57
Cdh4P39038 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cdh4P39038 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdh4P39038 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdh4P39038 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.5□□□□□ -0.57
Cdh4P39038 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms