Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp13P33435 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Mmp13P33435 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp13P33435 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Mmp13P33435 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.28□□□□□ -0.44
Mmp13P33435 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp13P33435 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Mmp13P33435 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Mmp13P33435 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp13P33435 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp13P33435 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.28□□□□□ -0.44
Mmp13P33435 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp13P33435 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Gm21769-201ENSMUST00000211922 111 ntBASIC12.28□□□□□ -0.44
Mmp13P33435 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.28□□□□□ -0.44
Mmp13P33435 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.28□□□□□ -0.44
Mmp13P33435 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Gm10076-201ENSMUST00000073238 384 ntBASIC12.28□□□□□ -0.44
Mmp13P33435 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.28□□□□□ -0.44
Mmp13P33435 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.28□□□□□ -0.44
Mmp13P33435 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.28□□□□□ -0.44
Mmp13P33435 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Mmp13P33435 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp13P33435 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp13P33435 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp13P33435 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp13P33435 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp13P33435 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Mmp13P33435 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Mmp13P33435 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.27□□□□□ -0.44
Mmp13P33435 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp13P33435 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Mmp13P33435 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Mmp13P33435 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.27□□□□□ -0.45
Mmp13P33435 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.27□□□□□ -0.45
Mmp13P33435 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Mmp13P33435 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Gm12058-201ENSMUST00000118614 437 ntBASIC12.27□□□□□ -0.45
Mmp13P33435 Gm13875-201ENSMUST00000120162 282 ntBASIC12.27□□□□□ -0.45
Mmp13P33435 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Mmp13P33435 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Mmp13P33435 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.27□□□□□ -0.45
Mmp13P33435 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Gm20482-202ENSMUST00000174729 825 ntBASIC12.27□□□□□ -0.45
Mmp13P33435 Gm31256-201ENSMUST00000194705 506 ntBASIC12.27□□□□□ -0.45
Mmp13P33435 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.27□□□□□ -0.45
Mmp13P33435 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Mmp13P33435 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.27□□□□□ -0.45
Mmp13P33435 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Mmp13P33435 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Mmp13P33435 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Mmp13P33435 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.27□□□□□ -0.45
Mmp13P33435 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.26□□□□□ -0.45
Mmp13P33435 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Mmp13P33435 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Mmp13P33435 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms