Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Gm11425-201ENSMUST00000119608 498 ntBASIC10.33□□□□□ -0.76
Slc6a1P31648 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Mir7085-201ENSMUST00000184353 66 ntBASIC10.33□□□□□ -0.76
Slc6a1P31648 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.33□□□□□ -0.76
Slc6a1P31648 Gm4034-201ENSMUST00000187674 480 ntBASIC10.33□□□□□ -0.76
Slc6a1P31648 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.33□□□□□ -0.76
Slc6a1P31648 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Gm9396-201ENSMUST00000076703 567 ntBASIC10.33□□□□□ -0.76
Slc6a1P31648 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.33□□□□□ -0.76
Slc6a1P31648 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Gm5124-202ENSMUST00000132683 2083 ntBASIC10.33□□□□□ -0.76
Slc6a1P31648 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.33□□□□□ -0.76
Slc6a1P31648 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.33□□□□□ -0.76
Slc6a1P31648 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Slc6a1P31648 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.32□□□□□ -0.76
Slc6a1P31648 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.32□□□□□ -0.76
Slc6a1P31648 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.32□□□□□ -0.76
Slc6a1P31648 Gm10156-201ENSMUST00000122364 462 ntBASIC10.32□□□□□ -0.76
Slc6a1P31648 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.32□□□□□ -0.76
Slc6a1P31648 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Gm29127-201ENSMUST00000188304 517 ntBASIC10.32□□□□□ -0.76
Slc6a1P31648 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.32□□□□□ -0.76
Slc6a1P31648 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.32□□□□□ -0.76
Slc6a1P31648 Gm43818-201ENSMUST00000200605 466 ntBASIC10.32□□□□□ -0.76
Slc6a1P31648 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Slc6a1P31648 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Slc6a1P31648 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms