Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm42599-201ENSMUST00000201308 469 ntBASIC13.74□□□□□ -0.21
Vcam1P29533 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.74□□□□□ -0.21
Vcam1P29533 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.74□□□□□ -0.21
Vcam1P29533 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.74□□□□□ -0.21
Vcam1P29533 Gm8342-201ENSMUST00000209839 757 ntBASIC13.74□□□□□ -0.21
Vcam1P29533 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.74□□□□□ -0.21
Vcam1P29533 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vcam1P29533 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vcam1P29533 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.74□□□□□ -0.21
Vcam1P29533 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vcam1P29533 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Vcam1P29533 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vcam1P29533 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.73□□□□□ -0.21
Vcam1P29533 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Vcam1P29533 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vcam1P29533 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.73□□□□□ -0.21
Vcam1P29533 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.73□□□□□ -0.21
Vcam1P29533 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Vcam1P29533 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Vcam1P29533 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.73□□□□□ -0.21
Vcam1P29533 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.73□□□□□ -0.21
Vcam1P29533 Mir8093-201ENSMUST00000185043 137 ntBASIC13.73□□□□□ -0.21
Vcam1P29533 Gm42657-201ENSMUST00000201746 211 ntBASIC13.73□□□□□ -0.21
Vcam1P29533 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.73□□□□□ -0.21
Vcam1P29533 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.73□□□□□ -0.21
Vcam1P29533 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Vcam1P29533 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vcam1P29533 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.73□□□□□ -0.21
Vcam1P29533 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vcam1P29533 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Vcam1P29533 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.72□□□□□ -0.21
Vcam1P29533 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.72□□□□□ -0.21
Vcam1P29533 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Vcam1P29533 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vcam1P29533 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Mir1956-201ENSMUST00000157748 65 ntBASIC13.72□□□□□ -0.21
Vcam1P29533 Gm8194-201ENSMUST00000159783 859 ntBASIC13.72□□□□□ -0.21
Vcam1P29533 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Vcam1P29533 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Gm9358-201ENSMUST00000183067 927 ntBASIC13.72□□□□□ -0.21
Vcam1P29533 Gm8574-201ENSMUST00000203207 924 ntBASIC13.72□□□□□ -0.21
Vcam1P29533 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.72□□□□□ -0.21
Vcam1P29533 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.72□□□□□ -0.21
Vcam1P29533 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Vcam1P29533 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vcam1P29533 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms