Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.13□□□□□ -0.63
Cd40lgP27548 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.13□□□□□ -0.63
Cd40lgP27548 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cd40lgP27548 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.13□□□□□ -0.63
Cd40lgP27548 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.13□□□□□ -0.63
Cd40lgP27548 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Rgr-203ENSMUST00000225070 4704 ntBASIC11.12□□□□□ -0.63
Cd40lgP27548 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cd40lgP27548 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm18304-201ENSMUST00000189162 546 ntBASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.12□□□□□ -0.63
Cd40lgP27548 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.12□□□□□ -0.63
Cd40lgP27548 Gm39404-201ENSMUST00000216350 313 ntBASIC11.12□□□□□ -0.63
Cd40lgP27548 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.12□□□□□ -0.63
Cd40lgP27548 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd40lgP27548 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cd40lgP27548 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cd40lgP27548 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cd40lgP27548 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cd40lgP27548 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cd40lgP27548 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.11□□□□□ -0.63
Cd40lgP27548 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd40lgP27548 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.11□□□□□ -0.63
Cd40lgP27548 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cd40lgP27548 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Cd40lgP27548 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.11□□□□□ -0.63
Cd40lgP27548 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms