Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
TnfP06804 Gm12036-201ENSMUST00000120008 530 ntBASIC12.7□□□□□ -0.38
TnfP06804 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.7□□□□□ -0.38
TnfP06804 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
TnfP06804 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.7□□□□□ -0.38
TnfP06804 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.7□□□□□ -0.38
TnfP06804 Mir3547-201ENSMUST00000175461 88 ntBASIC12.7□□□□□ -0.38
TnfP06804 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TnfP06804 Gm38117-201ENSMUST00000194653 939 ntBASIC12.7□□□□□ -0.38
TnfP06804 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TnfP06804 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.7□□□□□ -0.38
TnfP06804 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TnfP06804 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.7□□□□□ -0.38
TnfP06804 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TnfP06804 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.7□□□□□ -0.38
TnfP06804 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TnfP06804 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.7□□□□□ -0.38
TnfP06804 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TnfP06804 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TnfP06804 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TnfP06804 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TnfP06804 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TnfP06804 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
TnfP06804 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
TnfP06804 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.69□□□□□ -0.38
TnfP06804 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.69□□□□□ -0.38
TnfP06804 Gm13916-201ENSMUST00000117368 628 ntBASIC12.69□□□□□ -0.38
TnfP06804 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.69□□□□□ -0.38
TnfP06804 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.69□□□□□ -0.38
TnfP06804 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.69□□□□□ -0.38
TnfP06804 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Gm42599-201ENSMUST00000201308 469 ntBASIC12.69□□□□□ -0.38
TnfP06804 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.69□□□□□ -0.38
TnfP06804 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.69□□□□□ -0.38
TnfP06804 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
TnfP06804 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TnfP06804 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TnfP06804 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TnfP06804 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
TnfP06804 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TnfP06804 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.68□□□□□ -0.38
TnfP06804 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TnfP06804 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.68□□□□□ -0.38
TnfP06804 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
TnfP06804 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.68□□□□□ -0.38
TnfP06804 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TnfP06804 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.68□□□□□ -0.38
TnfP06804 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.68□□□□□ -0.38
TnfP06804 Gm15595-201ENSMUST00000120840 961 ntBASIC12.68□□□□□ -0.38
TnfP06804 Gm15566-201ENSMUST00000121130 590 ntBASIC12.68□□□□□ -0.38
TnfP06804 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms