Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
P04946 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P04946 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P04946 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04946 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P04946 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04946 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04946 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04946 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
P04946 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04946 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
P04946 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P04946 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
P04946 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.27□□□□□ -0.76
P04946 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04946 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04946 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04946 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04946 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04946 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04946 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04946 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
P04946 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P04946 Gm12616-201ENSMUST00000118594 382 ntBASIC10.27□□□□□ -0.77
P04946 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.27□□□□□ -0.77
P04946 Gm15595-201ENSMUST00000120840 961 ntBASIC10.27□□□□□ -0.77
P04946 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
P04946 Mir1943-201ENSMUST00000158276 73 ntBASIC10.27□□□□□ -0.77
P04946 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Gm12624-201ENSMUST00000177615 382 ntBASIC10.27□□□□□ -0.77
P04946 Gm12621-201ENSMUST00000177760 382 ntBASIC10.27□□□□□ -0.77
P04946 Gm12615-201ENSMUST00000177970 382 ntBASIC10.27□□□□□ -0.77
P04946 Gm12622-201ENSMUST00000177975 382 ntBASIC10.27□□□□□ -0.77
P04946 Gm12627-201ENSMUST00000178412 382 ntBASIC10.27□□□□□ -0.77
P04946 Gm12625-201ENSMUST00000179122 382 ntBASIC10.27□□□□□ -0.77
P04946 Gm12614-201ENSMUST00000179586 382 ntBASIC10.27□□□□□ -0.77
P04946 Gm12613-201ENSMUST00000180323 382 ntBASIC10.27□□□□□ -0.77
P04946 Gm5523-201ENSMUST00000180415 997 ntBASIC10.27□□□□□ -0.77
P04946 Gm29499-201ENSMUST00000189151 486 ntBASIC10.27□□□□□ -0.77
P04946 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.27□□□□□ -0.77
P04946 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Gm28329-201ENSMUST00000191208 689 ntBASIC10.27□□□□□ -0.77
P04946 Gm29171-201ENSMUST00000191397 486 ntBASIC10.27□□□□□ -0.77
P04946 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.27□□□□□ -0.77
P04946 Mir7686-201ENSMUST00000200604 57 ntBASIC10.27□□□□□ -0.77
P04946 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P04946 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P04946 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.27□□□□□ -0.77
P04946 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P04946 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
P04946 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.27□□□□□ -0.77
P04946 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
P04946 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P04946 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P04946 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
P04946 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
P04946 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
P04946 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.26□□□□□ -0.77
P04946 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
P04946 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
P04946 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
P04946 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
P04946 Gm12579-201ENSMUST00000118040 783 ntBASIC10.26□□□□□ -0.77
P04946 Gm15566-201ENSMUST00000121130 590 ntBASIC10.26□□□□□ -0.77
P04946 Gm7666-201ENSMUST00000146631 819 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms