Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
P04940 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
P04940 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
P04940 Gm22133-201ENSMUST00000102082 109 ntBASIC9.71□□□□□ -0.86
P04940 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
P04940 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
P04940 Gm11660-201ENSMUST00000120955 412 ntBASIC9.71□□□□□ -0.86
P04940 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.71□□□□□ -0.86
P04940 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.71□□□□□ -0.86
P04940 Gm25668-201ENSMUST00000157700 129 ntBASIC9.71□□□□□ -0.86
P04940 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Gm25700-201ENSMUST00000177693 110 ntBASIC9.71□□□□□ -0.86
P04940 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.71□□□□□ -0.86
P04940 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.71□□□□□ -0.86
P04940 Gm44967-201ENSMUST00000207047 631 ntBASIC9.71□□□□□ -0.86
P04940 Gm45224-201ENSMUST00000208203 414 ntBASIC9.71□□□□□ -0.86
P04940 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Gm5705-201ENSMUST00000066241 711 ntBASIC9.71□□□□□ -0.86
P04940 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
P04940 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
P04940 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
P04940 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
P04940 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.71□□□□□ -0.86
P04940 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
P04940 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.71□□□□□ -0.86
P04940 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04940 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
P04940 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.7□□□□□ -0.86
P04940 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.7□□□□□ -0.86
P04940 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Gm13350-201ENSMUST00000120519 479 ntBASIC9.7□□□□□ -0.86
P04940 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
P04940 Gm26361-201ENSMUST00000158868 186 ntBASIC9.7□□□□□ -0.86
P04940 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.7□□□□□ -0.86
P04940 Gm7584-201ENSMUST00000175829 940 ntBASIC9.7□□□□□ -0.86
P04940 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
P04940 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Gm8343-201ENSMUST00000182705 994 ntBASIC9.7□□□□□ -0.86
P04940 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.7□□□□□ -0.86
P04940 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.7□□□□□ -0.86
P04940 Gm7172-201ENSMUST00000218047 1152 ntBASIC9.7□□□□□ -0.86
P04940 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.7□□□□□ -0.86
P04940 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
P04940 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.7□□□□□ -0.86
P04940 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
P04940 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
P04940 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
P04940 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.7□□□□□ -0.86
P04940 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.7□□□□□ -0.86
P04940 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
P04940 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04940 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
P04940 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
P04940 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms