Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm2423-201ENSMUST00000074863 733 ntBASIC10.53□□□□□ -0.72
P04224 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.53□□□□□ -0.72
P04224 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
P04224 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.53□□□□□ -0.72
P04224 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.53□□□□□ -0.72
P04224 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.53□□□□□ -0.72
P04224 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
P04224 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.53□□□□□ -0.72
P04224 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
P04224 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
P04224 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.52□□□□□ -0.72
P04224 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
P04224 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
P04224 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P04224 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
P04224 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
P04224 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
P04224 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
P04224 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.52□□□□□ -0.73
P04224 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
P04224 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
P04224 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
P04224 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
P04224 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.52□□□□□ -0.73
P04224 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 AC098716.1-201ENSMUST00000213527 703 ntBASIC10.52□□□□□ -0.73
P04224 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.52□□□□□ -0.73
P04224 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.52□□□□□ -0.73
P04224 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
P04224 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.52□□□□□ -0.73
P04224 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
P04224 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
P04224 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
P04224 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P04224 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.51□□□□□ -0.73
P04224 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.51□□□□□ -0.73
P04224 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Rgr-203ENSMUST00000225070 4704 ntBASIC10.51□□□□□ -0.73
P04224 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.51□□□□□ -0.73
P04224 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
P04224 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
P04224 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.51□□□□□ -0.73
P04224 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Gm13612-201ENSMUST00000119276 390 ntBASIC10.51□□□□□ -0.73
P04224 Gm16479-201ENSMUST00000121706 932 ntBASIC10.51□□□□□ -0.73
P04224 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.51□□□□□ -0.73
P04224 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
P04224 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.51□□□□□ -0.73
P04224 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms