Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Hcn1O88704 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Hcn1O88704 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.52□□□□□ -0.57
Hcn1O88704 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Hcn1O88704 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.52□□□□□ -0.57
Hcn1O88704 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hcn1O88704 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Gm24231-201ENSMUST00000104315 133 ntBASIC11.51□□□□□ -0.57
Hcn1O88704 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hcn1O88704 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Hcn1O88704 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.51□□□□□ -0.57
Hcn1O88704 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.51□□□□□ -0.57
Hcn1O88704 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.51□□□□□ -0.57
Hcn1O88704 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.51□□□□□ -0.57
Hcn1O88704 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Gm9257-201ENSMUST00000221254 232 ntBASIC11.51□□□□□ -0.57
Hcn1O88704 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.51□□□□□ -0.57
Hcn1O88704 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hcn1O88704 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.5□□□□□ -0.57
Hcn1O88704 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hcn1O88704 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hcn1O88704 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Hcn1O88704 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Hcn1O88704 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.5□□□□□ -0.57
Hcn1O88704 Gm15547-201ENSMUST00000122152 333 ntBASIC11.5□□□□□ -0.57
Hcn1O88704 Gm13570-201ENSMUST00000140763 309 ntBASIC11.5□□□□□ -0.57
Hcn1O88704 Gm26083-201ENSMUST00000157904 193 ntBASIC11.5□□□□□ -0.57
Hcn1O88704 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.5□□□□□ -0.57
Hcn1O88704 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.5□□□□□ -0.57
Hcn1O88704 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.5□□□□□ -0.57
Hcn1O88704 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Hcn1O88704 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hcn1O88704 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.5□□□□□ -0.57
Hcn1O88704 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
Hcn1O88704 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hcn1O88704 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Cog3-203ENSMUST00000227473 4197 ntBASIC11.49□□□□□ -0.57
Hcn1O88704 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms