Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm15236-201ENSMUST00000117309 379 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm24749-201ENSMUST00000157838 343 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm28071-201ENSMUST00000190355 478 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm43184-201ENSMUST00000197247 542 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.89□□□□□ -0.51
Pdlim1O70400 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm270-201ENSMUST00000223010 976 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Gm5705-201ENSMUST00000066241 711 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pdlim1O70400 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.89□□□□□ -0.51
Pdlim1O70400 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Pdlim1O70400 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pdlim1O70400 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.88□□□□□ -0.51
Pdlim1O70400 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pdlim1O70400 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pdlim1O70400 Gm23949-201ENSMUST00000104027 127 ntBASIC11.88□□□□□ -0.51
Pdlim1O70400 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Pdlim1O70400 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.88□□□□□ -0.51
Pdlim1O70400 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Pdlim1O70400 Mir7677-201ENSMUST00000184226 67 ntBASIC11.88□□□□□ -0.51
Pdlim1O70400 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.88□□□□□ -0.51
Pdlim1O70400 Gm19287-201ENSMUST00000203190 358 ntBASIC11.88□□□□□ -0.51
Pdlim1O70400 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Gm8385-201ENSMUST00000058999 643 ntBASIC11.88□□□□□ -0.51
Pdlim1O70400 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pdlim1O70400 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pdlim1O70400 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pdlim1O70400 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Gm2383-201ENSMUST00000181461 807 ntBASIC11.87□□□□□ -0.51
Pdlim1O70400 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.87□□□□□ -0.51
Pdlim1O70400 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.87□□□□□ -0.51
Pdlim1O70400 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.87□□□□□ -0.51
Pdlim1O70400 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.87□□□□□ -0.51
Pdlim1O70400 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pdlim1O70400 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms